IN SILICO STUDIES OF JUSTICIA ADHATODA, OCIMUM SANCTUM PLANT COMPOUNDS AS MYCOBACTERIUM TUBERCULOSIS FTSZ INHIBITORS
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Kumar Vinay, Abbas Abul K, Robbins Basic Pathology. 8th ed. Saunders. Elsevier. pp. 516-522. 2007.
World Health Organization (WHO). Tuberculosis Fact sheet N°104- Global and regional incidence. March 2006.
Tomioka H, Namba K, Development of anti-tuberculosis drugs: Current status and future prospects. 2006 Dec; 81(12):753-74.
Erickson, HP FtsZ, a prokaryotic homolog of tubulin? Cell 80, 367–70.
Vaughan S, Wickstead B, Gull K & Addinall SG, Molecular evolution of FtsZ protein sequences encoded within the genomes of archaea, bacteria, and eukaryote. J. Mol. Evol. 58, 19–29, 2004.
Jones G, Wilett P, Glen RC, Leach AR, Taylor R, Development and validation of a genetic algorithm for flexible docking. J Mol Biol. 267, 1997, 727-748.
Paul D. Lyne, Structure-based virtual screening: an overview. DDT Vol. 7, No. 20 October 2002 1047-1055.
Rarey M, Kramer B, Lengauer T, Klebe G, A fast flexible docking method using an incremental construction algorithm. J Mol Biol. 261, 1996, 470-489.
Morris, GM, Good sell DS, Halliday R, Huey R, Hart WE, Belew RK, Arthur,J. J Comput Chem. 19, 1998, 1639-1644.
Shen J, Xu X, Cheng F, Liu H, Luo X, Shen J, Chen K, Zhao W, Shen X, Jiang H, Virtual screening on natural products for discovering active compounds and target information. Curr Med Chem. 10, 2003, 2327-2342.
Schapira M, Abagyan R, Totrov M, Nuclear hormone receptor targeted virtual screening. J Med Chem. 2003; 46:3045–3059.
W Walters, Drug Discovery Today, 1998, 3:160.
R Thomsen, MH Christensen, J. Med. Chem. 2006, 49, 3315–3321.
O Trott, AJ Olson, AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading. Journal of Computational Chemistry 2009.
Schneidman-Duhovny D, Inbar Y, Polak V, Shatsky M, Halperin I, Benyamini H, Barzilai A, Dror O, Haspel N, Nussinov R, Wolfson HJ. Taking geometry to its edge: fast unbound rigid and hing e-bent docking. Proteins, 2003, Jul 1; 52(1): 107-112.
DTH Chang, YJ Oyang, JH Lin, MEDock: a web server for efficient prediction of ligand binding sites based on a novel optimization algorithm. Nucleic acids research, 33, 2005, W233 -W238.
Jones G, Willet P, Glen RC, Leach AR, Taylor R, Development and Validation of a Genetic Algorithm for Flexible Docking. J. Mol. Biol. 1997, 267:727-748.
Kitchen DB, Decornez H, Furr JR, 2004, docking and scoring in virtual screening for drug discovery: methods and applications. Nat Rev Drug Discov 3: 935-949.
Li Z, Wan H, Shi Y, Ouyang P, 2004, Personal Experience with Four Kinds of Chemical Structure Drawing Software: Review on ChemDraw, Chem Window, ISIS/Draw, and ChemSketch. J. Chem. Inf. Comput. Sci. 44 (5): 1886–1890.
Coutsias EA, Seok C, Dill KA, 2004, using quaternions to calculate RMSD. J Comput Chem 25 (15): 1849–1857.
http://www.ars-grin.gov/duke/
Honglin Li, Hailei Zhang, Mingyue Zheng, An effective docking strategy for virtual screening based on multi-objective optimization algorithm. BMC Bioinformatics. 2009; 10: 58.
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